Basic Information
Locus ID:
Oco13G001060
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG13 | 1147860 | 1152146 | + | Oco13G001060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 82,808.68 Da | 46.15 | 85.73 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 413 | 679 | 2.8E-18 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 98 | 244 | 1.11E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 386 | 681 | 2.08E-40 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 478 | 700 | 5.3E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 477 | 7.0E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 267 | 1.2E-29 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 405 | 686 | 20.216579 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 723 | 749 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 723 | 751 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015647874.1 | probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Oryza sativa Japonica Group] | 0 |
| C0LGK4 | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana OX=3702 GN=At2g16250 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CZM3 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_007368 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology