Basic Information
Locus ID:
Oco12G017580
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 22395509 | 22400047 | - | Oco12G017580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 106,151.74 Da | 42.26 | 103.26 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 171 | 227 | 5.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 67 | 2.9E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 701 | 976 | 1.2E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 531 | 590 | 2.0E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 292 | 313 | 0.44 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 120 | 137 | 0.18 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 697 | 976 | 7.15E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 338 | 597 | 8.67E-57 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 75 | 400 | 2.35E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 84 | 335 | 2.3E-65 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 83 | 7.4E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 777 | 986 | 2.9E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 669 | 776 | 4.5E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 336 | 625 | 2.1E-85 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 141 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 314 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 169 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 481 | 504 | 96.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 553 | 577 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 505 | 529 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 400.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 700 | 951 | 8.4E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 700 | 977 | 35.891186 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_006656496.2 | leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 [Oryza brachyantha] | 0 |
| Q5Z9N5 | Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1 | 0 | |
| TrEMBL | J3MHP5 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102722222 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology