Basic Information
Locus ID:
Oco12G016060
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 21106777 | 21107772 | - | Oco12G016060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 11,687.31 Da | 29.32 | 101.94 | 0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 3 | 77 | 1.7E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 73 | 4.75E-19 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 100 | 1.1E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 108 | 13.093044 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 6 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27300.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_040381554.1 | putative cysteine-rich receptor-like protein kinase 20 isoform X2 [Oryza brachyantha] | 0 |
| O81833 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana OX=3702 GN=SD11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0P0X0E5 | Os06g0689600 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0689600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah017684 |
| Brassicaceae | Brassica nigra | 1 | BniB05g057190.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G0459 |
| Poaceae | Oryza coarctata | 1 | Oco12G016060 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7928 |