Basic Information
Locus ID:
Oco12G015080
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 20068168 | 20070740 | - | Oco12G015080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 22,029.01 Da | 46.69 | 94.66 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 133 | 202 | 1.0E-10 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 120 | 202 | 1.99E-14 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 64 | 116 | 3.6E-5 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 110 | 204 | 7.2E-17 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 142 | 204 | 12.846567 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052159519.1 | BTB/POZ and MATH domain-containing protein 1-like [Oryza glaberrima] | 0 |
| TrEMBL | B8B165 | BTB domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24052 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 1 | Oco12G015080 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g45770.1 |