Basic Information
Locus ID:
Oco12G015060
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 20044538 | 20050590 | - | Oco12G015060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 33,377.08 Da | 40.25 | 94.69 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 135 | 237 | 8.3E-19 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 128 | 266 | 3.45E-25 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 125 | 214 | 5.4E-20 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 236 | 302 | 6.3E-19 | - |
| SMART | SM00225 | BTB_4 | 144 | 268 | 5.8E-18 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 144 | 211 | 17.624109 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_048546905.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum urartu] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0E562 | BTB domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Oco12G015060.