Basic Information
Locus ID:
Oco12G015050
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 20042614 | 20043378 | - | Oco12G015050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 27,920.46 Da | 42.85 | 87.87 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 16 | 61 | 3.87014E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 206 | 245 | 3.8E-6 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 195 | 246 | 3.82E-11 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 14 | 178 | 2.45E-9 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 15 | 179 | 3.4E-8 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 180 | 251 | 4.2E-13 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 213 | 254 | 10.426773 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_039807887.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0TGQ8 | BTB domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG276022 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Oco12G015050.