Basic Information
Locus ID:
Oco12G014820
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 19807797 | 19817945 | + | Oco12G014820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 59,911.41 Da | 57.00 | 75.80 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 230 | 493 | 1.4E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 207 | 493 | 1.32E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 305 | 512 | 1.6E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 203 | 303 | 9.7E-23 | - |
| SMART | SM00220 | serkin_6 | 227 | 493 | 8.9E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 227 | 500 | 35.170353 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 233 | 255 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 347 | 359 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 49 | - | - |
| Coils | Coil | Coil | 530 | 543 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006656340.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 [Oryza brachyantha] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CXQ2 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_038607 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology