Basic Information
Locus ID:
Oco12G014740
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 19756991 | 19760318 | - | Oco12G014740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 64,457.16 Da | 46.21 | 91.82 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 103 | 162 | 1.1E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 72 | 9.9E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 283 | 480 | 6.9E-27 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 217 | 1.17E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 283 | 548 | 7.26E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 244 | 354 | 5.3E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 355 | 559 | 8.3E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 228 | 8.2E-38 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 279 | 548 | 25.121077 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 558 | 593 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 593 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_040381339.1 | pollen receptor-like kinase 4 [Oryza brachyantha] | 0 |
| C0LGR9 | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana OX=3702 GN=At4g31250 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CX60 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_036163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology