Basic Information
Locus ID:
Oco12G012640
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 17408229 | 17413852 | - | Oco12G012640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 41,187.35 Da | 50.97 | 55.92 | -1.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 199 | 283 | 6.2E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 186 | - | - |
| Coils | Coil | Coil | 214 | 246 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_006656223.1 | protein WVD2-like 5 [Oryza brachyantha] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | J3MFN6 | TPX2 domain-containing protein OS=Oryza brachyantha OX=4533 GN=102715397 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology