Basic Information
Locus ID:
Oco12G011190
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 15186186 | 15189989 | + | Oco12G011190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 111,560.96 Da | 38.25 | 97.31 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 704 | 982 | 2.5243E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 2.7E-7 | IPR013210 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 533 | 575 | 3.2E-6 | IPR025875 |
| Pfam | PF00560 | Leucine Rich Repeat | 104 | 120 | 1.9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 700 | 979 | 6.2E-43 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 298 | 601 | 4.39E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 981 | 6.47E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 383 | 3.4E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 677 | 783 | 2.9E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 298 | 485 | 3.6E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 553 | 608 | 3.2E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 486 | 552 | 8.2E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 195 | 1.9E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 996 | 3.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 297 | 6.8E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 150.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 698 | 999 | 1.2E-39 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 102 | 126 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 581 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 176 | 199 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 532 | 556 | 35.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 698 | 981 | 38.831059 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 832 | 844 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 704 | 734 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 105 | 118 | 7.5E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 557 | 570 | 7.5E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_052159057.1 | receptor-like protein kinase 5 [Oryza glaberrima] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LCM1 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology