Basic Information
Locus ID:
Oco12G010020
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB And C-terminal Kelch
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 13257501 | 13263106 | - | Oco12G010020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 60,557.30 Da | 53.07 | 78.36 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 134 | 208 | 4.0864E-14 | - |
| Pfam | PF00651 | BTB/POZ domain | 128 | 222 | 1.8E-15 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 244 | 341 | 3.9E-8 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 134 | 222 | 2.2E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 421 | 534 | 1.18E-5 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 115 | 245 | 2.6E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 256 | 363 | 2.4E-12 | - |
| SMART | SM00225 | BTB_4 | 127 | 225 | 1.4E-9 | IPR000210 |
| SMART | SM00875 | BACK_2 | 240 | 342 | 7.7E-4 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 119 | 194 | 13.859985 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_006656117.2 | BTB/POZ domain-containing protein POB1-like [Oryza brachyantha] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6G1CN72 | BTB domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_012847 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology