Basic Information
Locus ID:
Oco12G009610
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 12510592 | 12511933 | - | Oco12G009610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.84 | 44,379.12 Da | 44.94 | 82.12 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 102 | 362 | 3.4E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 76 | 363 | 1.91E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 176 | 373 | 7.8E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 78 | 175 | 2.7E-25 | - |
| SMART | SM00220 | serkin_6 | 99 | 362 | 8.7E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 99 | 376 | 29.121 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 105 | 127 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 208 | 220 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 65 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38240.3 | - | 0 |
| RefSeq | XP_015634366.1 | rust resistance kinase Lr10 [Oryza sativa Japonica Group] | 0 |
| P93604 | Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 | 0 | |
| TrEMBL | J3MDU1 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102710216 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology