Basic Information
Locus ID:
Oco12G009600
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Phosphatidylinositol 3- and 4-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 12458275 | 12461305 | + | Oco12G009600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 62,822.42 Da | 47.46 | 96.30 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 120 | 188 | 5.52474E-9 | - |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 275 | 516 | 6.6E-49 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 54 | 114 | 2.3E-11 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 120 | 191 | 1.6E-10 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 36 | 115 | 5.3E-13 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 405 | 567 | 8.26E-5 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 114 | 191 | 3.45E-13 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 119 | 215 | 7.4E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 43 | 116 | 2.8E-9 | - |
| SMART | SM00213 | ubq_7 | 118 | 190 | 4.4E-6 | IPR000626 |
| SMART | SM00213 | ubq_7 | 41 | 113 | 0.48 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 120 | 194 | 13.010011 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 41 | 113 | 12.901134 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_006656057.1 | phosphatidylinositol 4-kinase gamma 4-like [Oryza brachyantha] | 0 |
| Q6K881 | Phosphatidylinositol 4-kinase gamma 4 OS=Oryza sativa subsp. japonica OX=39947 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1EB62 | 1-phosphatidylinositol 4-kinase OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_020119 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology