Basic Information
Locus ID:
Oco12G007500
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 8151028 | 8153559 | + | Oco12G007500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.74 | 39,922.29 Da | 64.20 | 75.74 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 24 | 64 | 1.26E-7 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 228 | 334 | 9.3E-12 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 16 | 69 | 5.9E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 220 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_015641456.1 | probable L-type lectin-domain containing receptor kinase S.7 [Oryza sativa Japonica Group] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | Q0DCV5 | Os06g0285400 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0285400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology