halophFGD

Basic Information

Locus ID: Oco12G007370

Species & Taxonomic ID: Oryza coarctata & 77588

Genome Assembly: GCA_030770085.1

Description: Histone-lysine N-methyltransferase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
LG12	7931829	7939917	+	Oco12G007370

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.10	100,679.46 Da	50.66	65.66	-0.73

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd10519	SET_EZH	748	864	6.58831E-75	-
Pfam	PF18264	CXC domain	686	717	5.7E-8	IPR041355
Pfam	PF00856	SET domain	759	862	3.9E-12	IPR001214
SUPERFAMILY	SSF82199	SET domain	648	866	1.83E-51	-
Gene3D	G3DSA:2.170.270.10	SET domain	648	865	3.7E-67	-
SMART	SM01114	CXC_2	682	719	3.0E-9	IPR033467
SMART	SM00317	set_7	748	869	9.2E-33	IPR001214
ProSiteProfiles	PS51633	CXC domain profile.	634	733	23.570848	IPR026489
ProSiteProfiles	PS51576	Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile.	7	897	273.164795	IPR025778
ProSiteProfiles	PS50280	SET domain profile.	748	863	14.588228	IPR001214
MobiDBLite	mobidb-lite	consensus disorder prediction	463	512	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	340	403	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	461	515	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	338	418	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	874	897	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Cellular Component:

GO:0031519 (PcG protein complex)

KEGG Pathway

KO Term:

K11430 ([histone H3]-lysine27 N-trimethyltransferase EZH2 [EC:2.1.1.356])

Pathway:

ko00310 (Lysine degradation) map00310 (Lysine degradation)

Reaction:

R03875 (Protein lysine + S-Adenosyl-L-methionine <=> Protein N6-methyl-L-lysine + S-Adenosyl-L-homocysteine) R03938 (S-Adenosyl-L-methionine + Histone-L-lysine <=> S-Adenosyl-L-homocysteine + Histone N6-methyl-L-lysine) R04866 (S-Adenosyl-L-methionine + Protein N6-methyl-L-lysine <=> S-Adenosyl-L-homocysteine + Protein N6,N6-dimethyl-L-lysine) R04867 (S-Adenosyl-L-methionine + Protein N6,N6-dimethyl-L-lysine <=> S-Adenosyl-L-homocysteine + Protein N6,N6,N6-trimethyl-L-lysine)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G23380.1	SET domain-containing protein. Similar to the product of the Polycomb-group gene Enhancer of zeste. Required for stable repression of AG and AP3. Putative role in cell fate determination. Involved in the control of leaf morphogenesis. mutants exhibit curled, involute leaves. AGAMOUS and APETALA3 are ectopically expressed in the mutant.
RefSeq	XP_052159236.1	histone-lysine N-methyltransferase CLF [Oryza glaberrima]
Swiss-Prot	Q5VN06	Histone-lysine N-methyltransferase CLF OS=Oryza sativa subsp. japonica OX=39947 GN=CLF PE=1 SV=1
TrEMBL	D4N3S3	Putative polycomb protein EZ1 OS=Oryza meyeriana var. granulata OX=110450 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg35113, jg40015
Aizoaceae	Mesembryanthemum crystallinum	2	gene_15041, gene_19265
Amaranthaceae	Atriplex hortensis	4	Ah000105, Ah004342, Ah005404, Ah005405
Amaranthaceae	Beta vulgaris	2	BVRB_5g106820, BVRB_5g121850
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg24543, Sbi_jg31326, Sbi_jg57960, Sbi_jg8391
Amaranthaceae	Salicornia europaea	2	Seu_jg11656, Seu_jg25585
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00004473, GOSA_00010875
Amaranthaceae	Suaeda glauca	4	Sgl51274, Sgl54528, Sgl56576, Sgl59869
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000005614, gene:ENSEOMG00000007252 ... gene:ENSEOMG00000021857, gene:ENSEOMG00000021878, gene:ENSEOMG00000023549, gene:ENSEOMG00000024022, gene:ENSEOMG00000024435
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.5AG0002010, CQ.Regalona.r1.5AG0027020 ... CQ.Regalona.r1.5BG0002130, CQ.Regalona.r1.5BG0028620
Anacardiaceae	Pistacia vera	2	pistato.v30008100, pistato.v30206130
Apiaceae	Apium graveolens	4	Ag4G01104, Ag5G00291, Ag5G02886, Ag9G02327
Arecaceae	Cocos nucifera	3	COCNU_08G005060, COCNU_11G000180, COCNU_16G004410
Arecaceae	Phoenix dactylifera	3	gene-LOC103696622, gene-LOC103713764, gene-LOC103724029
Asparagaceae	Asparagus officinalis	2	AsparagusV1_07.1673.V1.1, AsparagusV1_08.1457.V1.1
Asteraceae	Flaveria trinervia	4	Ftri10G00317, Ftri15G03347, Ftri17G16197, Ftri18G17065
Brassicaceae	Arabidopsis thaliana	2	AT2G23380.1, AT4G02020.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10000037m.g.v1.0, Thhalv10028423m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp4g02390.v2.2, Sp6g01900.v2.2
Brassicaceae	Brassica nigra	2	BniB01g020410.2N, BniB08g044480.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq05G1333, Ceq06G1050
Casuarinaceae	Casuarina glauca	2	Cgl05G1338, Cgl06G1092
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno15g06510, gene.Cymno18g03860
Dunaliellaceae	Dunaliella salina	1	Dusal.0011s00040.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate02g09320, gene.Thate05g09090
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG02.2109, evm.TU.LG04.450
Plantaginaceae	Plantago ovata	3	Pov_00024947, Pov_00029191, Pov_00029199
Plumbaginaceae	Limonium bicolor	3	Lb8G36103, Lb8G36104, Lb8G36105
Poaceae	Echinochloa crus-galli	6	AH01.3875, AH06.370, BH01.4213, BH06.488, CH01.4500 ... CH06.489
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_3AG0245610, gene-QOZ80_3AG0245620 ... gene-QOZ80_3BG0282500, gene-QOZ80_6AG0510020, gene-QOZ80_6BG0462170
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.4HG0382250.1, HORVU.MOREX.r3.7HG0655900.1 ... HORVU.MOREX.r3.7HG0655960.1
Poaceae	Lolium multiflorum	3	gene-QYE76_028415, gene-QYE76_063025, gene-QYE76_068467
Poaceae	Oryza coarctata	3	Oco06G014810, Oco11G007280, Oco12G007370
Poaceae	Oryza sativa	2	LOC_Os03g19480.1, LOC_Os06g16390.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G377500, gene-BS78_10G055000
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0102572, Pt_Chr0105706, Pt_Chr0402067, Pt_Chr0402103
Poaceae	Sporobolus alterniflorus	6	Chr01G032910, Chr04G009580, Chr11G022110, Chr12G006670 ... Chr14G002360, Chr21G001470
Poaceae	Thinopyrum elongatum	3	Tel4E01G329400, Tel7E01G260300, Tel7E01G260700
Poaceae	Triticum dicoccoides	5	gene_TRIDC4AG017090, gene_TRIDC4BG031660 ... gene_TRIDC7AG014970, gene_TRIDC7AG015060, gene_TRIDC7BG004320
Poaceae	Triticum aestivum	9	TraesCS4A02G121300.4, TraesCS4B02G181400.3 ... TraesCS4D02G184600.3, TraesCS7A02G128300.1, TraesCS7A02G128600.1, TraesCS7B02G028200.2, TraesCS7B02G028500.2, TraesCS7D02G127100.2, TraesCS7D02G127400.1
Poaceae	Zea mays	3	Zm00001eb014730_P001, Zm00001eb271490_P005 ... Zm00001eb396070_P002
Poaceae	Zoysia japonica	2	nbis-gene-3518, nbis-gene-5096
Poaceae	Zoysia macrostachya	2	Zma_g29163, Zma_g3769
Portulacaceae	Portulaca oleracea	4	evm.TU.LG02.1253, evm.TU.LG09.719, evm.TU.LG10.688 ... evm.TU.LG17.699
Posidoniaceae	Posidonia oceanica	2	gene.Posoc07g04650, gene.Posoc07g12580
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_6_RagTag.1859, evm.TU.Scaffold_9_RagTag.749
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-17281, nbisL1-mrna-21472
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-20015, nbisL1-mrna-8423
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-11917, nbisL1-mrna-18542
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000003l.629, evm.TU.utg000011l.1134
Rhizophoraceae	Kandelia obovata	2	Maker00007791, Maker00009601
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-15493, nbisL1-mrna-1612
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-3234, nbisL1-mrna-5293
Salicaceae	Populus euphratica	4	populus_peu14405, populus_peu23376, populus_peu27351 ... populus_peu31334
Solanaceae	Lycium barbarum	3	gene-LOC132616927, gene-LOC132623421, gene-LOC132644930
Solanaceae	Solanum chilense	3	SOLCI000735100, SOLCI000869500, SOLCI001076900
Solanaceae	Solanum pennellii	3	gene-LOC107001506, gene-LOC107011481, gene-LOC107014997
Tamaricaceae	Reaumuria soongarica	2	gene_17331, gene_3847
Tamaricaceae	Tamarix chinensis	3	TC04G1756, TC07G1795, TC07G2777
Zosteraceae	Zostera marina	2	Zosma02g18570.v3.1, Zosma05g30470.v3.1