Basic Information
Locus ID:
Oco12G007310
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 7856356 | 7861001 | + | Oco12G007310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 70,757.81 Da | 36.14 | 92.69 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 309 | 575 | 3.3E-43 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 124 | 146 | 0.12 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 6.8E-13 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 197 | 1.21E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 290 | 581 | 1.04E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 214 | 1.8E-54 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 383 | 595 | 7.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 275 | 382 | 9.3E-38 | - |
| SMART | SM00220 | serkin_6 | 306 | 561 | 1.6E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 306 | 561 | 35.862919 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 312 | 334 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 425 | 437 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 591 | 609 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 584 | 609 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_040380863.1 | LRR receptor kinase SERL2 [Oryza brachyantha] | 0 |
| Q9FP13 | LRR receptor kinase SERL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CVI8 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_032411 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology