Basic Information
Locus ID:
Oco12G007000
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 7325186 | 7333284 | - | Oco12G007000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 181,274.59 Da | 48.56 | 78.57 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 251 | 516 | 1.26734E-122 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1348 | 1611 | 7.37594E-139 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1387 | 1553 | 2.0E-32 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 272 | 507 | 4.2E-28 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1554 | 1609 | 6.1E-7 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1347 | 1611 | 5.49E-79 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 312 | 482 | 3.4E-36 | IPR027409 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 267 | 502 | 8.55E-5 | IPR027410 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 311 | 482 | 2.1E-48 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1470 | 1612 | 4.7E-43 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1308 | 1468 | 2.8E-35 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1327 | 1612 | 9.2E-114 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1285 | 1611 | 58.765873 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 76 | - | - |
| Coils | Coil | Coil | 1034 | 1054 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_015642842.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Oryza sativa Japonica Group] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0A7V0 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology