Basic Information
Locus ID:
Oco12G004220
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 3772856 | 3775985 | - | Oco12G004220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.05 | 84,461.07 Da | 50.13 | 75.44 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 17 | 143 | 1.45839E-58 | - |
| Pfam | PF00069 | Protein kinase domain | 437 | 689 | 7.0E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 415 | 691 | 3.1E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 118 | 1.67E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 412 | 508 | 8.6E-27 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 5 | 120 | 5.2E-7 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 509 | 712 | 5.6E-47 | - |
| SMART | SM00220 | serkin_6 | 436 | 699 | 3.2E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 436 | 699 | 35.382362 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 554 | 566 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 765 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 199 | - | - |
| Coils | Coil | Coil | 328 | 348 | - | - |
| Coils | Coil | Coil | 302 | 322 | - | - |
| Coils | Coil | Coil | 362 | 407 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31230.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_015693406.2 | U-box domain-containing protein 35-like [Oryza brachyantha] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0L8V0 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology