Basic Information
Locus ID:
Oco12G003060
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 2742886 | 2744285 | - | Oco12G003060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 24,003.17 Da | 29.95 | 93.64 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 62 | 202 | 1.3E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 202 | 1.41E-23 | IPR011009 |
| Gene3D | G3DSA:3.50.4.10 | Hepatocyte Growth Factor | 16 | 61 | 9.2E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 62 | 209 | 3.3E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 209 | 14.91633 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53420.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_052158642.1 | putative receptor protein kinase ZmPK1 isoform X2 [Oryza glaberrima] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0E0A5J0 | Receptor-like serine/threonine-protein kinase OS=Oryza glumipatula OX=40148 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_028431 |
| Poaceae | Oryza coarctata | 2 | Oco11G003090, Oco12G003060 |