Basic Information
Locus ID:
Oco12G001600
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 1446313 | 1449880 | + | Oco12G001600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 72,453.87 Da | 42.41 | 96.36 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 416 | 675 | 1.69739E-85 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 415 | 675 | 4.3E-39 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 6.7E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 142 | 201 | 6.3E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 675 | 4.98E-54 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 236 | 2.0E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 488 | 1.0E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 176 | 4.8E-44 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 245 | 6.9E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 679 | 3.0E-39 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 410 | 679 | 28.654577 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 301 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006655759.3 | somatic embryogenesis receptor kinase 4 [Oryza brachyantha] | 0 |
| Q9SX31 | Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 GN=PERK9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0L7F8 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology