Basic Information
Locus ID:
Oco12G001080
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BAG domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 959905 | 962092 | + | Oco12G001080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.80 | 37,582.75 Da | 50.06 | 80.58 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 75 | 143 | 1.4E-9 | IPR000626 |
| Pfam | PF02179 | BAG domain | 170 | 244 | 1.7E-13 | IPR003103 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 61 | 147 | 1.13E-16 | IPR029071 |
| SUPERFAMILY | SSF63491 | BAG domain | 128 | 250 | 2.49E-20 | IPR036533 |
| Gene3D | G3DSA:3.10.20.90 | - | 74 | 144 | 2.3E-19 | - |
| Gene3D | G3DSA:1.20.58.120 | BAG domain | 145 | 250 | 1.2E-33 | IPR036533 |
| SMART | SM00213 | ubq_7 | 75 | 145 | 1.4E-4 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 73 | 143 | 11.899466 | IPR000626 |
| ProSiteProfiles | PS51035 | BAG domain profile. | 168 | 246 | 9.279609 | IPR003103 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 338 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52060.1 | BCL-2-associated athanogene 1. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. | 0 |
| RefSeq | XP_040381580.1 | BAG family molecular chaperone regulator 3-like [Oryza brachyantha] | 0 |
| Q0WUQ1 | BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CS20 | BAG domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_016232 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology