Basic Information
Locus ID:
Oco11G017080
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 23389971 | 23393764 | + | Oco11G017080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 67,618.08 Da | 39.48 | 88.44 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 277 | 575 | 9.22175E-128 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 246 | 562 | 1.6E-95 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 277 | 585 | 7.59E-70 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 278 | 583 | 1.0E-42 | IPR029044 |
| Coils | Coil | Coil | 146 | 176 | - | - |
| Coils | Coil | Coil | 208 | 228 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_015640943.1 | polygalacturonate 4-alpha-galacturonosyltransferase [Oryza sativa Japonica Group] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0Q2K5 | Hexosyltransferase OS=Oryza rufipogon OX=4529 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology