Basic Information
Locus ID:
Oco11G015790
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 22322988 | 22323440 | - | Oco11G015790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 16,132.77 Da | 66.69 | 101.66 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052157561.1 | putative F-box/FBD/LRR-repeat protein At5g44950 [Oryza glaberrima] | 0 |
| TrEMBL | I1Q4R8 | F-box domain-containing protein OS=Oryza glaberrima OX=4538 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH06.2904 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0549130, gene-QOZ80_6BG0502690 |
| Poaceae | Oryza coarctata | 1 | Oco11G015790 |
| Poaceae | Oryza sativa | 5 | LOC_Os06g02054.1, LOC_Os06g43740.1, LOC_Os06g47400.1 ... |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_10G237500, gene-BS78_10G237800, gene-BS78_K227900 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr11G001780, Chr11G001800, Chr11G001820 |