Basic Information
Locus ID:
Oco11G015600
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 22143294 | 22145807 | + | Oco11G015600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 30,475.49 Da | 44.78 | 80.43 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 219 | 262 | 4.9E-7 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 219 | 268 | 3.89E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 207 | 269 | 1.4E-10 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 220 | 262 | 8.579733 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 39 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052159526.1 | uncharacterized protein LOC127777058 [Oryza glaberrima] | 0 |
| TrEMBL | A0A0E0LEW4 | RING-type domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology