Basic Information
Locus ID:
Oco11G014910
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 21291878 | 21292834 | - | Oco11G014910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 32,884.00 Da | 45.05 | 85.13 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 22 | 124 | 1.50098E-6 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 156 | 255 | 1.8E-20 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 21 | 126 | 1.28E-9 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 142 | 254 | 4.71E-28 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 135 | 280 | 5.8E-35 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 10 | 126 | 1.6E-8 | IPR008974 |
| SMART | SM00225 | BTB_4 | 164 | 265 | 2.4E-16 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 164 | 231 | 17.127741 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_025882225.1 | BTB/POZ and MATH domain-containing protein 1 [Oryza sativa Japonica Group] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0E561 | BTB domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology