Basic Information
Locus ID:
Oco11G012620
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 18507050 | 18510944 | + | Oco11G012620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 40,974.07 Da | 52.07 | 52.84 | -1.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 197 | 281 | 4.2E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 112 | - | - |
| Coils | Coil | Coil | 212 | 239 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_015643561.1 | protein WVD2-like 5 isoform X3 [Oryza sativa Japonica Group] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | I1Q3I1 | TPX2 domain-containing protein OS=Oryza glaberrima OX=4538 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology