Basic Information
Locus ID:
Oco11G012050
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 17698830 | 17700065 | + | Oco11G012050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 40,070.76 Da | 52.25 | 76.02 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 132 | 167 | 2.9E-6 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 226 | 262 | 3.0E-4 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 170 | 215 | 3.4E-11 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 83 | 342 | 2.35E-43 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 77 | 362 | 2.5E-39 | IPR015915 |
| SMART | SM00612 | kelc_smart | 132 | 181 | 2.0E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 182 | 229 | 2.8E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_015641219.1 | F-box/kelch-repeat protein At1g80440 [Oryza sativa Japonica Group] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0ABG3 | F-box domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology