Basic Information
Locus ID:
Oco11G011100
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 16247853 | 16251313 | + | Oco11G011100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 111,600.88 Da | 41.98 | 97.12 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 700 | 976 | 5.02183E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 296 | 355 | 3.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 696 | 973 | 1.5E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 64 | 1.5E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 78 | 137 | 6.0E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 508 | 567 | 3.8E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 380 | 3.4E-58 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 295 | 594 | 1.1E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 975 | 9.02E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 778 | 986 | 9.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 192 | 1.5E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 294 | 5.8E-22 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 679 | 777 | 3.5E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 295 | 390 | 2.8E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 485 | 615 | 1.6E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 391 | 484 | 9.5E-16 | IPR032675 |
| SMART | SM00220 | serkin_6 | 694 | 981 | 1.5E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 99 | 123 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 529 | 553 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 247 | 271 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 7.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 318 | 342 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 196 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 150.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 694 | 975 | 38.279831 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 700 | 728 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 826 | 838 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 554 | 567 | 4.1E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 102 | 115 | 4.1E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_052159057.1 | receptor-like protein kinase 5 [Oryza glaberrima] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LCM1 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology