Basic Information
Locus ID:
Oco11G010720
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 15728246 | 15735615 | + | Oco11G010720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 32,245.67 Da | 47.41 | 94.81 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 63 | 159 | 5.6E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 63 | 158 | 8.9E-30 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 98 | 158 | 3.2E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 58 | 97 | 1.3E-7 | - |
| SMART | SM00220 | serkin_6 | 7 | 226 | 1.7E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 240 | 15.227279 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 80 | 92 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30980.1 | SHAGGY-related protein kinase dZeta. Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. | 0 |
| RefSeq | XP_052158988.1 | shaggy-related protein kinase GSK4 [Oryza glaberrima] | 0 |
| Q5Z7J0 | Shaggy-related protein kinase GSK4 OS=Oryza sativa subsp. japonica OX=39947 GN=GSK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2Z6N2J6 | Protein kinase domain-containing protein (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_385210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Oco11G010720.