Basic Information
Locus ID:
Oco11G007460
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 8284119 | 8286469 | + | Oco11G007460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.84 | 72,833.87 Da | 41.93 | 90.76 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 361 | 630 | 4.10957E-90 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 33 | 265 | 1.31336E-83 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 355 | 623 | 6.1E-47 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 41 | 272 | 3.3E-56 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 331 | 628 | 9.04E-75 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 31 | 265 | 5.6E-60 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 434 | 1.2E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 648 | 3.3E-61 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 28 | 265 | 2.9E-64 | - |
| SMART | SM00220 | serkin_6 | 355 | 621 | 8.4E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 355 | 644 | 37.17738 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 361 | 388 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 148 | 154 | - | IPR019825 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_052160705.1 | probable L-type lectin-domain containing receptor kinase S.7 [Oryza glaberrima] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0LAH8 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology