halophFGD

Basic Information

Locus ID: Oco11G007370

Species & Taxonomic ID: Oryza coarctata & 77588

Genome Assembly: GCA_030770085.1

Description: Protein kinase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
LG11	8132373	8133852	+	Oco11G007370

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
10.55	11,416.02 Da	27.91	78.23	-0.04

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03109	ABC1 family	27	53	2.9E-4	IPR004147
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	13	65	7.22E-9	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	9	76	4.0E-12	-

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G54590.1	Protein kinase superfamily protein.
RefSeq	XP_015643360.1	calcium/calmodulin-regulated receptor-like kinase 2 [Oryza sativa Japonica Group]
Swiss-Prot	Q9FIU5	Calcium/calmodulin-regulated receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRLK1 PE=1 SV=1
TrEMBL	A0A0P0WVL7	Os06g0283300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0283300 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg16728, jg29538
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000009421, gene:ENSEOMG00000042156
Amaranthaceae	Chenopodium quinoa	16	CQ.Regalona.r1.2AG0008970, CQ.Regalona.r1.2AG0009740 ... CQ.Regalona.r1.3AG0017000, CQ.Regalona.r1.4AG0015380, CQ.Regalona.r1.4AG0015390, CQ.Regalona.r1.4AG0015400, CQ.Regalona.r1.4AG0015410, CQ.Regalona.r1.4AG0017470, CQ.Regalona.r1.6AG0003150, CQ.Regalona.r1.6AG0011240, CQ.Regalona.r1.6AG0016360, CQ.Regalona.r1.7AG0018430, CQ.Regalona.r1.8AG0009770, CQ.Regalona.r1.8AG0010870, CQ.Regalona.r1.9AG0008020, CQ.Regalona.r1.9AG0019730
Arecaceae	Cocos nucifera	1	COCNU_06G011020
Casuarinaceae	Casuarina equisetifolia	1	Ceq08G2329
Casuarinaceae	Casuarina glauca	1	Cgl08G2495
Poaceae	Oryza coarctata	1	Oco11G007370
Portulacaceae	Portulaca oleracea	1	evm.TU.LG20.18
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-12421, nbisL1-mrna-17488
Rhizophoraceae	Kandelia obovata	1	Maker00018876
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-24574
Salicaceae	Populus euphratica	1	populus_peu25094