Basic Information
Locus ID:
Oco11G007240
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 7954575 | 7959492 | + | Oco11G007240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 69,918.00 Da | 36.06 | 92.97 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 125 | 184 | 4.8E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 311 | 576 | 2.2E-43 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 73 | 1.3E-13 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 286 | 577 | 1.05E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 198 | 3.74E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 277 | 384 | 3.6E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 215 | 1.2E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 385 | 595 | 1.1E-58 | - |
| SMART | SM00220 | serkin_6 | 308 | 576 | 1.0E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 308 | 586 | 35.806381 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 427 | 439 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 314 | 336 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 608 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 600 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_015643910.1 | LRR receptor kinase SERL2 [Oryza sativa Japonica Group] | 0 |
| Q9FP13 | LRR receptor kinase SERL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERL2 PE=1 SV=1 | 0 | |
| TrEMBL | D4N3T2 | Putative somatic embryogenesis protein kinase 1 OS=Oryza australiensis OX=4532 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology