Basic Information
Locus ID:
Oco11G006600
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 6737177 | 6739872 | - | Oco11G006600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 39,242.73 Da | 39.78 | 95.60 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 15 | 140 | 1.52538E-10 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 173 | 283 | 4.07355E-50 | - |
| Pfam | PF00651 | BTB/POZ domain | 169 | 284 | 8.6E-23 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 10 | 145 | 1.8E-14 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 154 | 285 | 2.51E-30 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 154 | 281 | 6.6E-36 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 286 | 352 | 1.7E-20 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 11 | 144 | 8.8E-14 | IPR008974 |
| SMART | SM00225 | BTB_4 | 177 | 287 | 3.5E-19 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 12 | 139 | 9.24264 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 177 | 238 | 18.079113 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_015641081.1 | BTB/POZ and MATH domain-containing protein 1 [Oryza sativa Japonica Group] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A3BAB0 | Os06g0251200 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0251200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology