Basic Information
Locus ID:
Oco11G005130
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
histone H2A K63-linked deubiquitination
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 4856619 | 4860977 | - | Oco11G005130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 29,183.29 Da | 40.04 | 76.27 | -0.61 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034600027.1 | uncharacterized protein LOC117860760 isoform X3 [Setaria viridis] | 0 |
| TrEMBL | A0A0E0JWW4 | USP domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH03.2807 |
| Poaceae | Oryza coarctata | 1 | Oco11G005130 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G124200 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G517400 |