Basic Information
Locus ID:
Oco11G004220
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 3684696 | 3686642 | + | Oco11G004220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 36,937.98 Da | 66.88 | 78.31 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 59 | 321 | 1.84058E-139 | - |
| Pfam | PF00069 | Protein kinase domain | 61 | 317 | 4.3E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 61 | 336 | 1.25E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 325 | 2.8E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 51 | 139 | 2.8E-23 | - |
| SMART | SM00220 | serkin_6 | 60 | 317 | 1.6E-83 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 317 | 46.68956 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 66 | 89 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51660.1 | mitogen-activated protein kinase kinase 4. Encodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. | 0 |
| RefSeq | XP_015643444.1 | mitogen-activated protein kinase kinase 5 [Oryza sativa Japonica Group] | 0 |
| O80397 | Mitogen-activated protein kinase kinase 4 OS=Arabidopsis thaliana OX=3702 GN=MKK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J6BUE4 | Protein kinase domain-containing protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0012g20528 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology