Basic Information
Locus ID:
Oco11G002640
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 2177551 | 2179196 | - | Oco11G002640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.91 | 18,169.94 Da | 66.89 | 80.76 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17123 | RING-like zinc finger | 135 | 160 | 9.5E-7 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 131 | 161 | 5.74E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 118 | 165 | 1.7E-5 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052158179.1 | E3 ubiquitin-protein ligase EL5-like [Oryza glaberrima] | 0 |
| TrEMBL | A0A0E0L826 | RING-type E3 ubiquitin transferase OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Oco11G002640.