Basic Information
Locus ID:
Oco11G001680
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 1412956 | 1416530 | - | Oco11G001680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 72,542.21 Da | 42.29 | 99.34 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 416 | 675 | 3.56967E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 67 | 9.2E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 143 | 202 | 5.9E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 675 | 3.6E-38 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 237 | 9.45E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 675 | 4.76E-55 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 247 | 6.8E-16 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 488 | 2.9E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 177 | 7.7E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 679 | 8.7E-39 | - |
| SMART | SM00369 | LRR_typ_2 | 189 | 213 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 165 | 9.3 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 410 | 679 | 28.470835 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 297 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015641981.1 | LRR receptor-like serine/threonine-protein kinase GSO1 [Oryza sativa Japonica Group] | 0 |
| Q9SX31 | Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 GN=PERK9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0P0WSM0 | Os06g0134700 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0134700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology