Basic Information
Locus ID:
Oco11G001430
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 1185710 | 1192395 | + | Oco11G001430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 102,683.12 Da | 31.33 | 104.66 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 620 | 883 | 1.14382E-99 | - |
| Pfam | PF13855 | Leucine rich repeat | 279 | 335 | 4.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 396 | 455 | 8.7E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 109 | 168 | 6.6E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 3 | 32 | 3.2E-5 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 202 | 219 | 0.46 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 617 | 876 | 1.3E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 590 | 880 | 2.97E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 229 | 519 | 1.47E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 285 | 1.0E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 155 | 1.8E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 314 | 412 | 3.4E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 585 | 689 | 1.2E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 313 | 3.6E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 690 | 895 | 4.0E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 156 | 228 | 3.4E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 413 | 538 | 7.1E-32 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 107 | 130 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 59 | 83 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 466 | 490 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 418 | 441 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 370 | 394 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 131 | 155 | 51.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 614 | 884 | 2.4E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 179 | 203 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 322 | 346 | 52.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 614 | 884 | 36.357609 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 133 | 155 | 7.596445 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 620 | 642 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 735 | 747 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62230.2 | ERECTA-like 1. Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development. | 0 |
| RefSeq | XP_015641250.1 | LRR receptor-like serine/threonine-protein kinase ERL1 [Oryza sativa Japonica Group] | 0 |
| Q658G7 | LRR receptor-like serine/threonine-protein kinase SIK1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0P0WSI5 | Os06g0130100 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0130100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 5 | jg14068, jg23990, jg4602, jg7950, jg7951 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_8054 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034440 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g033750 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg20415, Sbi_jg23364 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg17147 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009075 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl63595, Sgl68082 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000016861, gene:ENSEOMG00000022156 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0013550, CQ.Regalona.r1.2BG0015610 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30181640, pistato.v30260850 |
| Apiaceae | Apium graveolens | 4 | Ag2G01558, Ag2G01938, Ag7G00418, Ag9G02574 |
| Arecaceae | Cocos nucifera | 2 | COCNU_03G004100, COCNU_08G006160 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103704912, gene-LOC103721746 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_03.1302.V1.1, AsparagusV1_03.1303.V1.1 ... |
| Asteraceae | Flaveria trinervia | 3 | Ftri15G21699, Ftri1G09595, Ftri3G24629 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT2G26330.1, AT5G07180.1, AT5G62230.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10001898m.g.v1.0, Thhalv10003615m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp2g25430.v2.2, Sp4g06960.v2.2, Sp6g35720.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB02g024810.2N, BniB02g053710.2N, BniB06g010510.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq02G2029, Ceq03G2152 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl02G2101, Cgl03G2294 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno09g01110, gene.Cymno18g04630 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g05590, gene.Thate05g25620 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG01.2262, evm.TU.LG07.694 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00013390, Pov_00040854 |
| Plumbaginaceae | Limonium bicolor | 4 | Lb1G04460, Lb1G07869, Lb2G12716, Lb4G25723 |
| Poaceae | Echinochloa crus-galli | 9 | AH06.497, AH06.682, AH07.3673, BH06.187, BH06.756, BH07.3483 ... |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_2AG0147880, gene-QOZ80_2BG0203290 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.6HG0620170.1, HORVU.MOREX.r3.7HG0644570.1 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_025829, gene-QYE76_027423, gene-QYE76_027630 |
| Poaceae | Oryza coarctata | 6 | Oco03G023250, Oco04G023830, Oco11G001430, Oco11G004670 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os02g53720.1, LOC_Os06g03970.1, LOC_Os06g10230.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G295600, gene-BS78_10G022700 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0203053, Pt_Chr0304993, Pt_Chr0405065, Pt_Ctg00141 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr06G000840, Chr11G020700, Chr11G023880, Chr15G002120 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel6E01G593400, Tel7E01G139500, Tel7E01G326500 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC4AG062720, gene_TRIDC6AG050310 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS4A02G422700.1, TraesCS6A02G336300.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb256740_P004, Zm00001eb278640_P001 ... |
| Poaceae | Zoysia japonica | 6 | nbis-gene-34988, nbis-gene-40011, nbis-gene-40299 ... |
| Poaceae | Zoysia macrostachya | 5 | Zma_g17273, Zma_g29034, Zma_g29298, Zma_g31281, Zma_g31537 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.846, evm.TU.LG15.88 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc07g02910, gene.Posoc08g04520 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_10_RagTag.654, evm.TU.Scaffold_4_RagTag.1093 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12606, nbisL1-mrna-25861 |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-15597, nbisL1-mrna-18568, nbisL1-mrna-7054 |
| Rhizophoraceae | Ceriops zippeliana | 4 | nbisL1-mrna-12871, nbisL1-mrna-12872, nbisL1-mrna-1338 ... |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000008l.700, evm.TU.utg000010l.326 ... |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00000131, Maker00008771, Maker00015066 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-18292, nbisL1-mrna-2052, nbisL1-mrna-540 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-8056, nbisL1-mrna-8944, nbisL1-mrna-9406 |
| Salicaceae | Populus euphratica | 5 | populus_peu04947, populus_peu04948, populus_peu29180 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132631775, gene-LOC132635992 |
| Solanaceae | Solanum chilense | 2 | SOLCI004318000, SOLCI006698600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107014834, gene-LOC107028570 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_13363, gene_5183 |
| Tamaricaceae | Tamarix chinensis | 2 | TC06G1946, TC11G1493 |
| Zosteraceae | Zostera marina | 4 | Zosma01g09160.v3.1, Zosma02g09020.v3.1, Zosma03g25670.v3.1 ... |