Basic Information
Locus ID:
Oco11G001160
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BAG domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 971134 | 973369 | + | Oco11G001160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 36,492.44 Da | 48.33 | 80.15 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02179 | BAG domain | 169 | 243 | 2.1E-14 | IPR003103 |
| Pfam | PF00240 | Ubiquitin family | 74 | 142 | 2.6E-7 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 61 | 146 | 3.79E-17 | IPR029071 |
| SUPERFAMILY | SSF63491 | BAG domain | 127 | 249 | 3.27E-22 | IPR036533 |
| Gene3D | G3DSA:1.20.58.120 | BAG domain | 144 | 249 | 7.6E-35 | IPR036533 |
| Gene3D | G3DSA:3.10.20.90 | - | 72 | 143 | 2.9E-21 | - |
| SMART | SM00264 | BAG_1 | 164 | 245 | 0.0086 | IPR003103 |
| SMART | SM00213 | ubq_7 | 74 | 144 | 0.0095 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 72 | 142 | 11.376856 | IPR000626 |
| ProSiteProfiles | PS51035 | BAG domain profile. | 164 | 245 | 9.913789 | IPR003103 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 288 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52060.1 | BCL-2-associated athanogene 1. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. | 0 |
| RefSeq | XP_040381580.1 | BAG family molecular chaperone regulator 3-like [Oryza brachyantha] | 0 |
| Q0WUQ1 | BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CS20 | BAG domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_016232 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology