Basic Information
Locus ID:
Oco11G000770
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
PPR repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 707099 | 710171 | + | Oco11G000770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 51,299.24 Da | 45.41 | 81.69 | -0.07 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29230.1 | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0 |
| RefSeq | XP_015641391.1 | uncharacterized protein LOC9267779 [Oryza sativa Japonica Group] | 0 |
| Q9LS72 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0L706 | F-box domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.7HG0639350.1.CDS1 ... |
| Poaceae | Oryza coarctata | 1 | Oco11G000770 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G010900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0108182 |
| Poaceae | Thinopyrum elongatum | 9 | Tel7E01G067500, Tel7E01G070300, Tel7E01G070400 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG066860, gene_TRIDC4AG066990 |
| Poaceae | Triticum aestivum | 14 | TraesCS4A02G451900.1, TraesCS4A02G452200.1 ... |