Basic Information
Locus ID:
Oco10G015080
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Calcineurin B-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 20275430 | 20276827 | + | Oco10G015080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.66 | 16,074.86 Da | 51.37 | 80.07 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 52 | 118 | 1.04368E-9 | IPR002048 |
| Pfam | PF13202 | EF hand | 93 | 117 | 4.2E-9 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 19 | 129 | 2.14E-19 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 53 | 144 | 3.7E-26 | - |
| SMART | SM00054 | efh_1 | 92 | 120 | 0.0099 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 88 | 123 | 12.532831 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 54 | 79 | 8.934325 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 101 | 113 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64480.1 | calcineurin B-like protein 8. calcineurin B-like protein 8, member of plant-specific family of calcium sensor proteins containing 3 EF-hand motifs | 0 |
| RefSeq | XP_015637956.1 | calcineurin B-like protein 4 isoform X2 [Oryza sativa Japonica Group] | 0 |
| Q75KU4 | Calcineurin B-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0C787 | Calcineurin B-like protein OS=Oryza meridionalis OX=40149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology