Basic Information
Locus ID:
Oco10G014600
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 19919097 | 19922739 | - | Oco10G014600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 112,462.43 Da | 37.79 | 98.78 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 150 | 209 | 4.7E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 223 | 282 | 2.0E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 296 | 318 | 0.33 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 511 | 529 | 1.7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 705 | 928 | 1.1E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 70 | 9.5E-7 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 104 | 429 | 7.77E-63 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 366 | 597 | 1.73E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 697 | 993 | 1.5E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 369 | 626 | 1.0E-62 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 290 | 6.0E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 368 | 3.4E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 786 | 1013 | 4.3E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 685 | 785 | 1.5E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 188 | 2.1E-40 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 245 | 269 | 40.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 701 | 993 | 2.4E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 172 | 195 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 556 | 580 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 508 | 532 | 38.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 701 | 1002 | 36.131462 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 844 | 856 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 707 | 735 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 511 | 524 | 5.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 556 | 569 | 5.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_052155287.1 | receptor-like protein kinase HSL1 [Oryza glaberrima] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0L4T4 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology