Basic Information
Locus ID:
Oco10G013760
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 19118332 | 19123312 | + | Oco10G013760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 43,938.43 Da | 36.74 | 61.27 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 268 | 393 | 6.17327E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 77 | 207 | 1.30298E-44 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 77 | 207 | 1.8E-29 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 265 | 393 | 5.3E-26 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 63 | 206 | 4.45E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 251 | 393 | 1.31E-36 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 58 | 207 | 2.4E-48 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 245 | 393 | 1.3E-45 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 265 | 394 | 3.6E-37 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 77 | 208 | 1.4E-32 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 254 | 394 | 40.628635 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 66 | 208 | 46.481255 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_015639975.1 | jacalin-related lectin 3 isoform X2 [Oryza sativa Japonica Group] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0L4G7 | Jacalin-related lectin 3-like OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology