Basic Information
Locus ID:
Oco10G011550
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
cation transmembrane transporter activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 16869552 | 16876167 | + | Oco10G011550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 42,040.20 Da | 46.12 | 101.18 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 78 | 279 | 1.9E-17 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 289 | 359 | 1.3E-12 | IPR027470 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 282 | 360 | 1.31E-16 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 69 | 280 | 5.36E-27 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 281 | 361 | 4.1E-17 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 72 | 278 | 3.0E-29 | IPR027469 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39450.1 | Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance. | 0 |
| RefSeq | XP_003568286.1 | metal tolerance protein 5 [Brachypodium distachyon] | 0 |
| Q5NA18 | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1EIT9 | ZT_dimer domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_007725 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology