Basic Information
Locus ID:
Oco10G008290
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 12602681 | 12604978 | + | Oco10G008290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.34 | 22,376.40 Da | 49.62 | 73.81 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 168 | 204 | 7.58498E-17 | - |
| Pfam | PF01849 | NAC domain | 66 | 121 | 1.8E-21 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 165 | 204 | 2.6E-12 | IPR044034 |
| Gene3D | G3DSA:2.20.70.30 | - | 72 | 125 | 7.4E-31 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 166 | 203 | 4.4E-19 | - |
| SMART | SM01407 | NAC_2 | 66 | 122 | 3.2E-25 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 63 | 128 | 17.395691 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 167 | - | - |
| Coils | Coil | Coil | 1 | 23 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_052157503.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Oryza glaberrima] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0PLN4 | NAC-A/B domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology