Basic Information
Locus ID:
Oco10G008280
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 12600285 | 12602402 | + | Oco10G008280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.29 | 22,349.44 Da | 51.13 | 75.47 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 166 | 202 | 9.99857E-17 | - |
| Pfam | PF19026 | HYPK UBA domain | 163 | 202 | 5.5E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 64 | 119 | 8.7E-20 | IPR002715 |
| Gene3D | G3DSA:1.10.8.10 | - | 164 | 201 | 9.5E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 70 | 123 | 3.7E-29 | IPR038187 |
| SMART | SM01407 | NAC_2 | 64 | 120 | 2.8E-22 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 61 | 126 | 16.729593 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 50 | - | - |
| Coils | Coil | Coil | 1 | 23 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_006654327.1 | nascent polypeptide-associated complex subunit alpha-like protein [Oryza brachyantha] | 0 |
| Q9M612 | Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda OX=3352 PE=2 SV=1 | 0 | |
| TrEMBL | J3M6J5 | NAC-A/B domain-containing protein OS=Oryza brachyantha OX=4533 GN=102707311 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology