Basic Information
Locus ID:
Oco10G006990
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 10768502 | 10769613 | - | Oco10G006990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.75 | 32,469.04 Da | 44.29 | 88.99 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 35 | 196 | 6.2E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 17 | 197 | 1.64E-45 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 12 | 274 | 7.3E-46 | - |
| SMART | SM00220 | serkin_6 | 21 | 242 | 1.7E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 240 | 23.637007 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01820.1 | serine/threonine protein kinase 1. Encodes a CBL-interacting serine/threonine protein kinase. | 0 |
| RefSeq | XP_052156714.1 | CBL-interacting protein kinase 22 [Oryza glaberrima] | 0 |
| Q5KQF5 | CBL-interacting protein kinase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK22 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0L157 | non-specific serine/threonine protein kinase OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH05.3043 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0377380, gene-QOZ80_5BG0424530 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0208170.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco10G006990 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g26940.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G011280 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G912300 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG074950, gene_TRIDC2BG081980 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G536100.1.cds1, TraesCS2B02G566800.1.cds1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-42240, nbis-gene-42245 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g28013 |