Basic Information
Locus ID:
Oco10G006440
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 9732767 | 9737226 | + | Oco10G006440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 99,783.35 Da | 29.18 | 92.61 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 574 | 839 | 1.31055E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 6 | 28 | 5.1E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 569 | 836 | 3.3E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 556 | 861 | 9.71E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 12 | 378 | 4.76E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 541 | 643 | 7.7E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 149 | 2.8E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 250 | 378 | 9.5E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 644 | 857 | 1.1E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 150 | 249 | 1.4E-20 | IPR032675 |
| SMART | SM00220 | serkin_6 | 568 | 841 | 5.0E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 568 | 841 | 37.50246 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 574 | 596 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 688 | 700 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015639675.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Oryza sativa Japonica Group] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | B8AWC7 | Protein kinase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19395 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology