Basic Information
Locus ID:
Oco10G002560
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 2599127 | 2603894 | - | Oco10G002560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.58 | 133,558.55 Da | 47.46 | 80.93 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 573 | 821 | 7.84672E-126 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 966 | 1230 | 1.5E-123 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 604 | 740 | 2.8E-23 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 601 | 750 | 5.56E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 574 | 821 | 6.0E-58 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 483 | 1235 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 601 | 840 | 29.929918 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 147 | - | - |
| Coils | Coil | Coil | 924 | 944 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_006655002.2 | translocase of chloroplast 101, chloroplastic [Oryza brachyantha] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1EM22 | AIG1-type G domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_017259 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology