Basic Information
Locus ID:
Oco10G000310
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
MMT
Description:
Methionine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 251476 | 263519 | - | Oco10G000310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 111,267.15 Da | 37.34 | 93.53 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02440 | AdoMet_MTases | 33 | 106 | 5.04483E-5 | - |
| Pfam | PF00155 | Aminotransferase class I and II | 645 | 979 | 1.7E-13 | IPR004839 |
| Pfam | PF05175 | Methyltransferase small domain | 30 | 81 | 9.0E-7 | IPR007848 |
| SUPERFAMILY | SSF53383 | PLP-dependent transferases | 609 | 984 | 2.48E-30 | IPR015424 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 14 | 214 | 7.37E-20 | IPR029063 |
| SUPERFAMILY | SSF53383 | PLP-dependent transferases | 331 | 381 | 2.95E-5 | IPR015424 |
| Gene3D | G3DSA:3.40.640.10 | - | 642 | 868 | 1.6E-17 | IPR015421 |
| Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 | 869 | 979 | 1.6E-17 | IPR015422 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 5 | 221 | 2.4E-20 | - |
| ProSiteProfiles | PS51555 | Methionine S-methyltransferase (EC 2.1.1.12) family profile. | 1 | 999 | 620.562134 | IPR025779 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49810.1 | methionine S-methyltransferase. Arabidopsis thaliana methionine S-methyltransferase, an enzyme that catalyzes S -methylmethionine formation. | 0 |
| RefSeq | XP_052155863.1 | methionine S-methyltransferase isoform X1 [Oryza glaberrima] | 0 |
| Q8W519 | Methionine S-methyltransferase OS=Zea mays OX=4577 GN=MMT1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0D3G2A4 | methionine S-methyltransferase OS=Oryza barthii OX=65489 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg26456 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17656 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah012358 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g145640 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg42184, Sbi_jg44741 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg27352 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00002173, GOSA_00002174 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl31754, Sgl31755, Sgl37039, Sgl37040 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000000102, gene:ENSEOMG00000001463 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0009840, CQ.Regalona.r1.6BG0011160 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30104840 |
| Apiaceae | Apium graveolens | 1 | Ag5G01310 |
| Arecaceae | Cocos nucifera | 1 | scaffold004319G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103720822 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2692.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G26876 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G49810.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10028379m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g11200.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g060880.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G2284 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G2489 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g02600 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g14890 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.1061 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00001860 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb1G04805, Lb1G04837, Lb1G04838 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.671, BH05.725, CH05.828 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0408700, gene-QOZ80_5BG0457110 |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.1HG0002510.2, HORVU.MOREX.r3.3HG0318130.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_003318, gene-QYE76_008511, gene-QYE76_061175 ... |
| Poaceae | Oryza coarctata | 2 | Oco09G000230, Oco10G000310 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g01470.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G004800 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0105381, Pt_Chr0105463, Pt_Chr0105464, Pt_Chr0501050 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr18G003090, Chr22G016970 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G031300, Tel5E01G683900, Tel7E01G097800 |
| Poaceae | Triticum dicoccoides | 11 | gene_TRIDC1AG001430, gene_TRIDC1BG002220 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS1A02G013800.4, TraesCS1B02G017800.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb356170_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-18416 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g27526 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.299, evm.TU.LG26.746 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g05670 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.1537 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-6640 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-9517 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18927 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000009l.395 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00005912 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2827 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-21875 |
| Salicaceae | Populus euphratica | 1 | populus_peu08202 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132598588 |
| Solanaceae | Solanum chilense | 1 | SOLCI001251500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107006489 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_2392 |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G0758 |
| Zosteraceae | Zostera marina | 1 | Zosma01g33920.v3.1 |